Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04436 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04436 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.09■□□□□ 0.81
P04436 AL358852.1-201ENST00000623174 1268 ntBASIC20.09■□□□□ 0.81
P04436 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
P04436 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.09■□□□□ 0.81
P04436 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04436 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P04436 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04436 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.08■□□□□ 0.81
P04436 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.08■□□□□ 0.81
P04436 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
P04436 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.08■□□□□ 0.81
P04436 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.08■□□□□ 0.81
P04436 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04436 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04436 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.08■□□□□ 0.8
P04436 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04436 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04436 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
P04436 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
P04436 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.07■□□□□ 0.8
P04436 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.07■□□□□ 0.8
P04436 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.07■□□□□ 0.8
P04436 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.07■□□□□ 0.8
P04436 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.07■□□□□ 0.8
P04436 AL354811.1-201ENST00000610286 706 ntBASIC20.07■□□□□ 0.8
P04436 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.07■□□□□ 0.8
P04436 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
P04436 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
P04436 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04436 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.07■□□□□ 0.8
P04436 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.06■□□□□ 0.8
P04436 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.06■□□□□ 0.8
P04436 AC026271.2-201ENST00000428091 497 ntBASIC20.06■□□□□ 0.8
P04436 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
P04436 MIR5787-201ENST00000611784 55 ntBASIC20.06■□□□□ 0.8
P04436 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04436 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
P04436 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.05■□□□□ 0.8
P04436 AC097381.1-201ENST00000429019 1296 ntBASIC20.05■□□□□ 0.8
P04436 AC010141.3-201ENST00000456659 717 ntBASIC20.05■□□□□ 0.8
P04436 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.05■□□□□ 0.8
P04436 AC012414.1-201ENST00000556676 535 ntBASIC20.05■□□□□ 0.8
P04436 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.05■□□□□ 0.8
P04436 MIR6821-201ENST00000617625 74 ntBASIC20.05■□□□□ 0.8
P04436 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.05■□□□□ 0.8
P04436 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P04436 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P04436 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.04■□□□□ 0.8
P04436 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.04■□□□□ 0.8
P04436 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
P04436 AC105233.4-201ENST00000642045 216 ntBASIC20.04■□□□□ 0.8
P04436 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04436 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.03■□□□□ 0.8
P04436 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.03■□□□□ 0.8
P04436 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.03■□□□□ 0.8
P04436 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P04436 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.03■□□□□ 0.8
P04436 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
P04436 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
P04436 DUSP8P3-201ENST00000399571 1760 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms