Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF4O60810 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEF4O60810 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 SRD5A1P1-201ENST00000442297 786 ntBASIC21.23■□□□□ 0.99
PRAMEF4O60810 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEF4O60810 MIR3181-201ENST00000578512 73 ntBASIC21.23■□□□□ 0.99
PRAMEF4O60810 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF4O60810 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.22■□□□□ 0.99
PRAMEF4O60810 LINC01960-201ENST00000563759 1884 ntBASIC21.22■□□□□ 0.99
PRAMEF4O60810 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF4O60810 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
PRAMEF4O60810 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF4O60810 AC139530.1-201ENST00000575312 1977 ntBASIC21.22■□□□□ 0.99
PRAMEF4O60810 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF4O60810 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PRAMEF4O60810 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PRAMEF4O60810 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 AC133637.1-201ENST00000624115 1537 ntBASIC21.21■□□□□ 0.99
PRAMEF4O60810 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF4O60810 LINC00526-201ENST00000581067 1875 ntBASIC21.21■□□□□ 0.99
PRAMEF4O60810 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF4O60810 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PRAMEF4O60810 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF4O60810 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PRAMEF4O60810 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.2■□□□□ 0.99
PRAMEF4O60810 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRAMEF4O60810 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.2■□□□□ 0.98
PRAMEF4O60810 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF4O60810 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF4O60810 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF4O60810 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEF4O60810 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.19■□□□□ 0.98
PRAMEF4O60810 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF4O60810 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF4O60810 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF4O60810 AC242852.2-201ENST00000615738 1807 ntBASIC21.19■□□□□ 0.98
PRAMEF4O60810 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF4O60810 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF4O60810 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF4O60810 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PRAMEF4O60810 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF4O60810 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF4O60810 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRAMEF4O60810 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEF4O60810 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF4O60810 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 SERBP1P1-201ENST00000396021 1160 ntBASIC21.17■□□□□ 0.98
PRAMEF4O60810 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF4O60810 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF4O60810 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.17■□□□□ 0.98
PRAMEF4O60810 AC137767.1-201ENST00000602918 1920 ntBASIC21.17■□□□□ 0.98
PRAMEF4O60810 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF4O60810 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF4O60810 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF4O60810 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.16■□□□□ 0.98
PRAMEF4O60810 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.16■□□□□ 0.98
PRAMEF4O60810 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PRAMEF4O60810 AC131212.1-201ENST00000613771 668 ntBASIC21.16■□□□□ 0.98
PRAMEF4O60810 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF4O60810 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF4O60810 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF4O60810 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF4O60810 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF4O60810 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF4O60810 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms