Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC00565-201ENST00000562710 2331 ntBASIC20.43■□□□□ 0.86
HCN1O60741 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCN1O60741 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCN1O60741 PKD1P6-201ENST00000343738 4769 ntBASIC20.43■□□□□ 0.86
HCN1O60741 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCN1O60741 AL031432.3-201ENST00000607698 485 ntBASIC20.43■□□□□ 0.86
HCN1O60741 AC233723.2-201ENST00000623798 2106 ntBASIC20.43■□□□□ 0.86
HCN1O60741 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.43■□□□□ 0.86
HCN1O60741 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HCN1O60741 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HCN1O60741 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.42■□□□□ 0.86
HCN1O60741 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HCN1O60741 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.42■□□□□ 0.86
HCN1O60741 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.42■□□□□ 0.86
HCN1O60741 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.42■□□□□ 0.86
HCN1O60741 MIR935-201ENST00000401179 91 ntBASIC20.42■□□□□ 0.86
HCN1O60741 SUDS3P1-201ENST00000505831 966 ntBASIC20.42■□□□□ 0.86
HCN1O60741 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
HCN1O60741 AC011298.3-201ENST00000615796 283 ntBASIC20.42■□□□□ 0.86
HCN1O60741 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HCN1O60741 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
HCN1O60741 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCN1O60741 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HCN1O60741 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN1O60741 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCN1O60741 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HCN1O60741 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN1O60741 SERBP1P1-201ENST00000396021 1160 ntBASIC20.41■□□□□ 0.86
HCN1O60741 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.41■□□□□ 0.86
HCN1O60741 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN1O60741 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.41■□□□□ 0.86
HCN1O60741 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCN1O60741 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HCN1O60741 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HCN1O60741 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HCN1O60741 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN1O60741 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN1O60741 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN1O60741 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN1O60741 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN1O60741 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HCN1O60741 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.4■□□□□ 0.86
HCN1O60741 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.4■□□□□ 0.86
HCN1O60741 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCN1O60741 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HCN1O60741 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.39■□□□□ 0.86
HCN1O60741 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCN1O60741 C1orf229-201ENST00000623686 2258 ntBASIC20.39■□□□□ 0.86
HCN1O60741 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCN1O60741 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.39■□□□□ 0.86
HCN1O60741 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCN1O60741 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCN1O60741 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCN1O60741 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.39■□□□□ 0.85
HCN1O60741 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.39■□□□□ 0.85
HCN1O60741 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.39■□□□□ 0.85
HCN1O60741 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCN1O60741 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.38■□□□□ 0.85
HCN1O60741 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.38■□□□□ 0.85
HCN1O60741 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.38■□□□□ 0.85
HCN1O60741 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.38■□□□□ 0.85
HCN1O60741 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.38■□□□□ 0.85
HCN1O60741 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HCN1O60741 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.38■□□□□ 0.85
HCN1O60741 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.38■□□□□ 0.85
HCN1O60741 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
HCN1O60741 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HCN1O60741 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCN1O60741 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
HCN1O60741 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.37■□□□□ 0.85
HCN1O60741 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
HCN1O60741 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.37■□□□□ 0.85
HCN1O60741 MIR4767-201ENST00000582827 78 ntBASIC20.37■□□□□ 0.85
HCN1O60741 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.37■□□□□ 0.85
HCN1O60741 AC009086.3-201ENST00000623486 1008 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms