Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TSPAN3O60637 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TSPAN3O60637 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.67■■□□□ 1.22
TSPAN3O60637 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TSPAN3O60637 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.67■■□□□ 1.22
TSPAN3O60637 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.67■■□□□ 1.22
TSPAN3O60637 MIR6084-201ENST00000622012 110 ntBASIC22.67■■□□□ 1.22
TSPAN3O60637 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TSPAN3O60637 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.67■■□□□ 1.22
TSPAN3O60637 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TSPAN3O60637 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TSPAN3O60637 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TSPAN3O60637 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TSPAN3O60637 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
TSPAN3O60637 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TSPAN3O60637 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.66■■□□□ 1.22
TSPAN3O60637 MIR572-201ENST00000384983 95 ntBASIC22.66■■□□□ 1.22
TSPAN3O60637 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.66■■□□□ 1.22
TSPAN3O60637 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.66■■□□□ 1.22
TSPAN3O60637 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.66■■□□□ 1.22
TSPAN3O60637 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.66■■□□□ 1.22
TSPAN3O60637 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.66■■□□□ 1.22
TSPAN3O60637 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TSPAN3O60637 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TSPAN3O60637 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.65■■□□□ 1.22
TSPAN3O60637 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TSPAN3O60637 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TSPAN3O60637 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TSPAN3O60637 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
TSPAN3O60637 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TSPAN3O60637 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.65■■□□□ 1.22
TSPAN3O60637 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 MIR5787-201ENST00000611784 55 ntBASIC22.65■■□□□ 1.22
TSPAN3O60637 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.65■■□□□ 1.22
TSPAN3O60637 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TSPAN3O60637 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TSPAN3O60637 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
TSPAN3O60637 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TSPAN3O60637 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TSPAN3O60637 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TSPAN3O60637 AC087623.3-201ENST00000607047 1098 ntBASIC22.64■■□□□ 1.21
TSPAN3O60637 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TSPAN3O60637 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TSPAN3O60637 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TSPAN3O60637 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TSPAN3O60637 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.63■■□□□ 1.21
TSPAN3O60637 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TSPAN3O60637 AC092666.2-201ENST00000613287 246 ntBASIC22.63■■□□□ 1.21
TSPAN3O60637 MIR6821-201ENST00000617625 74 ntBASIC22.63■■□□□ 1.21
TSPAN3O60637 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TSPAN3O60637 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TSPAN3O60637 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.62■■□□□ 1.21
TSPAN3O60637 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TSPAN3O60637 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.62■■□□□ 1.21
TSPAN3O60637 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.62■■□□□ 1.21
TSPAN3O60637 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TSPAN3O60637 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TSPAN3O60637 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TSPAN3O60637 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TSPAN3O60637 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.61■■□□□ 1.21
TSPAN3O60637 DUSP8P3-201ENST00000399571 1760 ntBASIC22.61■■□□□ 1.21
TSPAN3O60637 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.61■■□□□ 1.21
TSPAN3O60637 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TSPAN3O60637 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TSPAN3O60637 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TSPAN3O60637 AC097381.1-201ENST00000429019 1296 ntBASIC22.61■■□□□ 1.21
TSPAN3O60637 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TSPAN3O60637 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.61■■□□□ 1.21
TSPAN3O60637 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.61■■□□□ 1.21
TSPAN3O60637 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TSPAN3O60637 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TSPAN3O60637 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.6■■□□□ 1.21
TSPAN3O60637 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.6■■□□□ 1.21
TSPAN3O60637 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.6■■□□□ 1.21
TSPAN3O60637 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.6■■□□□ 1.21
TSPAN3O60637 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 AC012414.1-201ENST00000556676 535 ntBASIC22.6■■□□□ 1.21
TSPAN3O60637 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TSPAN3O60637 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms