Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22■■□□□ 1.11
TSPAN6O43657 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN6O43657 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN6O43657 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TSPAN6O43657 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.99■■□□□ 1.11
TSPAN6O43657 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 AC087623.3-201ENST00000607047 1098 ntBASIC21.99■■□□□ 1.11
TSPAN6O43657 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TSPAN6O43657 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TSPAN6O43657 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN6O43657 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN6O43657 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.98■■□□□ 1.11
TSPAN6O43657 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.98■■□□□ 1.11
TSPAN6O43657 AC027612.3-201ENST00000413684 1047 ntBASIC21.98■■□□□ 1.11
TSPAN6O43657 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.98■■□□□ 1.11
TSPAN6O43657 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN6O43657 YBX1P1-201ENST00000445822 960 ntBASIC21.98■■□□□ 1.11
TSPAN6O43657 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN6O43657 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.98■■□□□ 1.11
TSPAN6O43657 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.97■■□□□ 1.11
TSPAN6O43657 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.97■■□□□ 1.11
TSPAN6O43657 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.97■■□□□ 1.11
TSPAN6O43657 AC087239.1-201ENST00000622671 572 ntBASIC21.97■■□□□ 1.11
TSPAN6O43657 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN6O43657 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.97■■□□□ 1.11
TSPAN6O43657 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
TSPAN6O43657 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.96■■□□□ 1.11
TSPAN6O43657 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TSPAN6O43657 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.96■■□□□ 1.11
TSPAN6O43657 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.96■■□□□ 1.11
TSPAN6O43657 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.96■■□□□ 1.11
TSPAN6O43657 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.96■■□□□ 1.11
TSPAN6O43657 AL031602.1-201ENST00000633169 911 ntBASIC21.96■■□□□ 1.11
TSPAN6O43657 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TSPAN6O43657 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TSPAN6O43657 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN6O43657 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.96■■□□□ 1.11
TSPAN6O43657 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
TSPAN6O43657 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
TSPAN6O43657 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN6O43657 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.95■■□□□ 1.1
TSPAN6O43657 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
TSPAN6O43657 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.95■■□□□ 1.1
TSPAN6O43657 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.95■■□□□ 1.1
TSPAN6O43657 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN6O43657 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.95■■□□□ 1.1
TSPAN6O43657 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN6O43657 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN6O43657 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TSPAN6O43657 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN6O43657 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN6O43657 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN6O43657 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.94■■□□□ 1.1
TSPAN6O43657 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.94■■□□□ 1.1
TSPAN6O43657 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN6O43657 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN6O43657 AC123595.1-201ENST00000440769 1046 ntBASIC21.94■■□□□ 1.1
TSPAN6O43657 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.94■■□□□ 1.1
TSPAN6O43657 AC105233.4-201ENST00000642045 216 ntBASIC21.94■■□□□ 1.1
TSPAN6O43657 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN6O43657 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.94■■□□□ 1.1
TSPAN6O43657 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN6O43657 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.94■■□□□ 1.1
TSPAN6O43657 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN6O43657 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
TSPAN6O43657 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TSPAN6O43657 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.93■■□□□ 1.1
TSPAN6O43657 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.93■■□□□ 1.1
TSPAN6O43657 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.93■■□□□ 1.1
TSPAN6O43657 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.93■■□□□ 1.1
TSPAN6O43657 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN6O43657 MIR6084-201ENST00000622012 110 ntBASIC21.93■■□□□ 1.1
TSPAN6O43657 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms