Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RER1O15258 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RER1O15258 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RER1O15258 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.3■□□□□ 0.68
RER1O15258 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RER1O15258 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.29■□□□□ 0.68
RER1O15258 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RER1O15258 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 LINC00526-201ENST00000581067 1875 ntBASIC19.29■□□□□ 0.68
RER1O15258 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
RER1O15258 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 AL512631.2-201ENST00000604634 923 ntBASIC19.29■□□□□ 0.68
RER1O15258 AC080038.3-201ENST00000623346 1952 ntBASIC19.29■□□□□ 0.68
RER1O15258 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RER1O15258 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RER1O15258 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
RER1O15258 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.28■□□□□ 0.68
RER1O15258 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 SRD5A1P1-201ENST00000442297 786 ntBASIC19.28■□□□□ 0.68
RER1O15258 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.28■□□□□ 0.68
RER1O15258 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.28■□□□□ 0.68
RER1O15258 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.28■□□□□ 0.68
RER1O15258 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.28■□□□□ 0.68
RER1O15258 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.28■□□□□ 0.68
RER1O15258 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.28■□□□□ 0.68
RER1O15258 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RER1O15258 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.27■□□□□ 0.68
RER1O15258 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 pRNA.6-201ENST00000610482 90 ntBASIC19.27■□□□□ 0.68
RER1O15258 pRNA.5-201ENST00000612139 90 ntBASIC19.27■□□□□ 0.68
RER1O15258 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RER1O15258 pRNA.11-201ENST00000618423 90 ntBASIC19.27■□□□□ 0.68
RER1O15258 pRNA.13-201ENST00000619112 90 ntBASIC19.27■□□□□ 0.68
RER1O15258 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.27■□□□□ 0.68
RER1O15258 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RER1O15258 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RER1O15258 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RER1O15258 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RER1O15258 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.26■□□□□ 0.67
RER1O15258 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.26■□□□□ 0.67
RER1O15258 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.26■□□□□ 0.67
RER1O15258 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RER1O15258 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.25■□□□□ 0.67
RER1O15258 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RER1O15258 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.25■□□□□ 0.67
RER1O15258 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RER1O15258 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.25■□□□□ 0.67
RER1O15258 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.25■□□□□ 0.67
RER1O15258 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.25■□□□□ 0.67
RER1O15258 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RER1O15258 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RER1O15258 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RER1O15258 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms