Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPC1O15118 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
NPC1O15118 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPC1O15118 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPC1O15118 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
NPC1O15118 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
NPC1O15118 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPC1O15118 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NPC1O15118 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.31■■□□□ 1.16
NPC1O15118 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.31■■□□□ 1.16
NPC1O15118 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.31■■□□□ 1.16
NPC1O15118 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
NPC1O15118 ABCB10P4-201ENST00000566803 2184 ntBASIC22.31■■□□□ 1.16
NPC1O15118 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPC1O15118 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NPC1O15118 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPC1O15118 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPC1O15118 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
NPC1O15118 AC010141.3-201ENST00000456659 717 ntBASIC22.3■■□□□ 1.16
NPC1O15118 NTF6G-201ENST00000591094 616 ntBASIC22.3■■□□□ 1.16
NPC1O15118 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NPC1O15118 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.3■■□□□ 1.16
NPC1O15118 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.3■■□□□ 1.16
NPC1O15118 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPC1O15118 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NPC1O15118 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.29■■□□□ 1.16
NPC1O15118 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NPC1O15118 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NPC1O15118 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPC1O15118 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.28■■□□□ 1.16
NPC1O15118 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NPC1O15118 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPC1O15118 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.28■■□□□ 1.16
NPC1O15118 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPC1O15118 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPC1O15118 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.28■■□□□ 1.16
NPC1O15118 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.28■■□□□ 1.16
NPC1O15118 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.28■■□□□ 1.16
NPC1O15118 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPC1O15118 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPC1O15118 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPC1O15118 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPC1O15118 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NPC1O15118 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.27■■□□□ 1.16
NPC1O15118 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.27■■□□□ 1.16
NPC1O15118 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPC1O15118 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
NPC1O15118 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.27■■□□□ 1.16
NPC1O15118 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPC1O15118 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NPC1O15118 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NPC1O15118 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPC1O15118 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPC1O15118 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPC1O15118 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPC1O15118 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPC1O15118 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.26■■□□□ 1.15
NPC1O15118 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.26■■□□□ 1.15
NPC1O15118 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
NPC1O15118 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.26■■□□□ 1.15
NPC1O15118 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPC1O15118 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.25■■□□□ 1.15
NPC1O15118 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.25■■□□□ 1.15
NPC1O15118 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.25■■□□□ 1.15
NPC1O15118 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
NPC1O15118 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.25■■□□□ 1.15
NPC1O15118 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.25■■□□□ 1.15
NPC1O15118 TPRG1LP1-201ENST00000598702 760 ntBASIC22.25■■□□□ 1.15
NPC1O15118 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
NPC1O15118 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.25■■□□□ 1.15
NPC1O15118 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.25■■□□□ 1.15
NPC1O15118 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.25■■□□□ 1.15
NPC1O15118 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.25■■□□□ 1.15
NPC1O15118 BX005040.4-201ENST00000637145 1518 ntBASIC22.25■■□□□ 1.15
NPC1O15118 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPC1O15118 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.24■■□□□ 1.15
NPC1O15118 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.24■■□□□ 1.15
NPC1O15118 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPC1O15118 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.24■■□□□ 1.15
NPC1O15118 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPC1O15118 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.24■■□□□ 1.15
NPC1O15118 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.24■■□□□ 1.15
NPC1O15118 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.24■■□□□ 1.15
NPC1O15118 RARRES2P11-201ENST00000635158 484 ntBASIC22.24■■□□□ 1.15
NPC1O15118 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPC1O15118 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NPC1O15118 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms