Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 AC137767.1-201ENST00000602918 1920 ntBASIC19.53■□□□□ 0.72
NPIPB4C9JG80 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 MIR3181-201ENST00000578512 73 ntBASIC19.53■□□□□ 0.72
NPIPB4C9JG80 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 AC080038.3-201ENST00000623346 1952 ntBASIC19.53■□□□□ 0.72
NPIPB4C9JG80 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPB4C9JG80 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 EP400NL-214ENST00000641289 2402 ntBASIC19.52■□□□□ 0.72
NPIPB4C9JG80 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 OR2I1P-207ENST00000453522 948 ntBASIC19.52■□□□□ 0.72
NPIPB4C9JG80 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 DUX4L19-201ENST00000557448 1267 ntBASIC19.52■□□□□ 0.72
NPIPB4C9JG80 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NPIPB4C9JG80 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 AC068587.7-201ENST00000641602 218 ntBASIC19.51■□□□□ 0.71
NPIPB4C9JG80 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB4C9JG80 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB4C9JG80 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.49■□□□□ 0.71
NPIPB4C9JG80 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB4C9JG80 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 MIR4466-201ENST00000606121 54 ntBASIC19.48■□□□□ 0.71
NPIPB4C9JG80 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB4C9JG80 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.47■□□□□ 0.71
NPIPB4C9JG80 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms