Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 RARRES2P4-201ENST00000514074 484 ntBASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 MIR4758-201ENST00000577688 71 ntBASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
C1QTNF9BB2RNN3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.89■□□□□ 0.94
C1QTNF9BB2RNN3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.89■□□□□ 0.93
C1QTNF9BB2RNN3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 ECEL1P3-201ENST00000427961 737 ntBASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 UBE2DNL-204ENST00000602536 740 ntBASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.88■□□□□ 0.93
C1QTNF9BB2RNN3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 AC133552.2-202ENST00000575694 574 ntBASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C1QTNF9BB2RNN3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 FAM210CP-201ENST00000445714 574 ntBASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 AC092118.2-201ENST00000613495 667 ntBASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C1QTNF9BB2RNN3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 AC104187.1-201ENST00000607510 612 ntBASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1QTNF9BB2RNN3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 UNC93B4-201ENST00000505679 747 ntBASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C1QTNF9BB2RNN3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C1QTNF9BB2RNN3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.83■□□□□ 0.93
C1QTNF9BB2RNN3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C1QTNF9BB2RNN3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.83■□□□□ 0.93
C1QTNF9BB2RNN3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C1QTNF9BB2RNN3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C1QTNF9BB2RNN3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C1QTNF9BB2RNN3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C1QTNF9BB2RNN3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C1QTNF9BB2RNN3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C1QTNF9BB2RNN3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.82■□□□□ 0.92
C1QTNF9BB2RNN3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms