Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA1A8K7I4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA1A8K7I4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.44■□□□□ 0.86
CLCA1A8K7I4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 AL137060.1-201ENST00000618151 2648 ntBASIC20.43■□□□□ 0.86
CLCA1A8K7I4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCA1A8K7I4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.42■□□□□ 0.86
CLCA1A8K7I4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA1A8K7I4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.41■□□□□ 0.86
CLCA1A8K7I4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA1A8K7I4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 AC096631.2-201ENST00000436136 790 ntBASIC20.4■□□□□ 0.86
CLCA1A8K7I4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA1A8K7I4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLCA1A8K7I4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCA1A8K7I4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCA1A8K7I4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms