Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
SAC3D1A6NKF1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAC3D1A6NKF1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.58■□□□□ 0.89
SAC3D1A6NKF1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SAC3D1A6NKF1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SAC3D1A6NKF1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SAC3D1A6NKF1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 AC133552.2-201ENST00000619106 1032 ntBASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAC3D1A6NKF1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SAC3D1A6NKF1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.55■□□□□ 0.88
SAC3D1A6NKF1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 AC087393.1-201ENST00000582896 145 ntBASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 AC018755.3-202ENST00000596210 929 ntBASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAC3D1A6NKF1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.53■□□□□ 0.88
SAC3D1A6NKF1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAC3D1A6NKF1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAC3D1A6NKF1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SAC3D1A6NKF1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAC3D1A6NKF1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SAC3D1A6NKF1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SAC3D1A6NKF1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SAC3D1A6NKF1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SAC3D1A6NKF1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SAC3D1A6NKF1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms