Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 SNX5-217ENST00000606557 1087 ntBASIC20.34■□□□□ 0.85
SH3D21A4FU49 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.34■□□□□ 0.85
SH3D21A4FU49 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SH3D21A4FU49 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SH3D21A4FU49 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 AL024507.2-201ENST00000606070 2574 ntBASIC20.34■□□□□ 0.85
SH3D21A4FU49 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.34■□□□□ 0.85
SH3D21A4FU49 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3D21A4FU49 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.33■□□□□ 0.85
SH3D21A4FU49 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SH3D21A4FU49 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.33■□□□□ 0.85
SH3D21A4FU49 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3D21A4FU49 AC096631.2-201ENST00000436136 790 ntBASIC20.33■□□□□ 0.85
SH3D21A4FU49 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.33■□□□□ 0.85
SH3D21A4FU49 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.33■□□□□ 0.85
SH3D21A4FU49 AC110285.6-201ENST00000617652 491 ntBASIC20.33■□□□□ 0.85
SH3D21A4FU49 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
SH3D21A4FU49 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SH3D21A4FU49 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3D21A4FU49 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3D21A4FU49 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3D21A4FU49 AC092053.2-201ENST00000640557 1818 ntBASIC20.32■□□□□ 0.84
SH3D21A4FU49 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3D21A4FU49 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SH3D21A4FU49 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.32■□□□□ 0.84
SH3D21A4FU49 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.32■□□□□ 0.84
SH3D21A4FU49 AL512631.2-201ENST00000604634 923 ntBASIC20.32■□□□□ 0.84
SH3D21A4FU49 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.32■□□□□ 0.84
SH3D21A4FU49 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3D21A4FU49 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3D21A4FU49 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3D21A4FU49 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SH3D21A4FU49 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SH3D21A4FU49 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3D21A4FU49 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3D21A4FU49 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3D21A4FU49 MIR6722-201ENST00000617286 78 ntBASIC20.31■□□□□ 0.84
SH3D21A4FU49 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.31■□□□□ 0.84
SH3D21A4FU49 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.31■□□□□ 0.84
SH3D21A4FU49 C11orf96-202ENST00000528572 1834 ntBASIC20.31■□□□□ 0.84
SH3D21A4FU49 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3D21A4FU49 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.3■□□□□ 0.84
SH3D21A4FU49 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.3■□□□□ 0.84
SH3D21A4FU49 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3D21A4FU49 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3D21A4FU49 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SH3D21A4FU49 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3D21A4FU49 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SH3D21A4FU49 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SH3D21A4FU49 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SH3D21A4FU49 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3D21A4FU49 AC139530.1-201ENST00000575312 1977 ntBASIC20.28■□□□□ 0.84
SH3D21A4FU49 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3D21A4FU49 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3D21A4FU49 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3D21A4FU49 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SH3D21A4FU49 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3D21A4FU49 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3D21A4FU49 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3D21A4FU49 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3D21A4FU49 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3D21A4FU49 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3D21A4FU49 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3D21A4FU49 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3D21A4FU49 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.27■□□□□ 0.84
SH3D21A4FU49 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SH3D21A4FU49 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3D21A4FU49 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms