Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CLDN5-201ENST00000403084 2357 ntBASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AF213884.3-201ENST00000563833 479 ntBASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AL031432.3-201ENST00000607698 485 ntBASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 MIR4767-201ENST00000582827 78 ntBASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AL138724.1-201ENST00000606771 1088 ntBASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ECEL1P1-201ENST00000373592 1742 ntBASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TCRBV4S1A1TA0A5B7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ZNRF2P3-201ENST00000424200 374 ntBASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AC009086.3-201ENST00000623486 1008 ntBASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV4S1A1TA0A5B7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 LINC00565-201ENST00000562710 2331 ntBASIC17.58■□□□□ 0.41
TCRBV4S1A1TA0A5B7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC011298.3-201ENST00000615796 283 ntBASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AL136967.2-201ENST00000623968 743 ntBASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC127496.7-201ENST00000625110 1798 ntBASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV4S1A1TA0A5B7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ESRRAP2-201ENST00000418437 1549 ntBASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV4S1A1TA0A5B7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.56■□□□□ 0.4
TCRBV4S1A1TA0A5B7 AC105265.2-201ENST00000467189 838 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms