Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 pRNA.6-201ENST00000610482 90 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 pRNA.5-201ENST00000612139 90 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 AC092666.2-201ENST00000613287 246 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 pRNA.11-201ENST00000618423 90 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 pRNA.13-201ENST00000619112 90 ntBASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV20A0A0B4J274 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 AC097381.1-201ENST00000429019 1296 ntBASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV20A0A0B4J274 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV20A0A0B4J274 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV20A0A0B4J274 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 AF106564.1-201ENST00000607058 2553 ntBASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV20A0A0B4J274 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV20A0A0B4J274 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 AC022211.4-201ENST00000625094 2161 ntBASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 AC126544.1-201ENST00000580842 1059 ntBASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 AC092667.1-201ENST00000434301 2586 ntBASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV20A0A0B4J274 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV20A0A0B4J274 LINC00565-201ENST00000562710 2331 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms