Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-4A0A0B4J246 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 BX664725.1-201ENST00000438252 379 ntBASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-4A0A0B4J246 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 AC092068.2-201ENST00000590491 1708 ntBASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-4A0A0B4J246 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 AC092667.1-201ENST00000434301 2586 ntBASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV8-4A0A0B4J246 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-4A0A0B4J246 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 ANOS2P-203ENST00000472227 1816 ntBASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-4A0A0B4J246 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms