Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 AC133637.1-201ENST00000624115 1537 ntBASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 AC006455.2-201ENST00000429931 906 ntBASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 MIR3181-201ENST00000578512 73 ntBASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV2A0A0B4J234 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV2A0A0B4J234 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 ESRRAP2-201ENST00000418437 1549 ntBASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 AC136469.2-201ENST00000623944 1028 ntBASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV2A0A0B4J234 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 SERBP1P1-201ENST00000396021 1160 ntBASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 OR2I1P-207ENST00000453522 948 ntBASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 AC068587.7-201ENST00000641602 218 ntBASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV2A0A0B4J234 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV2A0A0B4J234 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV2A0A0B4J234 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV2A0A0B4J234 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRAV2A0A0B4J234 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV2A0A0B4J234 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV2A0A0B4J234 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms