Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AL117328.2-201ENST00000624617 1940 ntBASIC17.06■□□□□ 0.32
TRBV7-1A0A0A6YYK4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AL136116.3-201ENST00000402907 1138 ntBASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV7-1A0A0A6YYK4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 GUSBP5-202ENST00000510805 1989 ntBASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC011298.3-201ENST00000615796 283 ntBASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC068587.7-201ENST00000641602 218 ntBASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC087742.1-201ENST00000575880 1738 ntBASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV7-1A0A0A6YYK4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC008406.3-201ENST00000620001 1374 ntBASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV7-1A0A0A6YYK4 AC242852.2-201ENST00000615738 1807 ntBASIC17.02■□□□□ 0.31
TRBV7-1A0A0A6YYK4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV7-1A0A0A6YYK4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV7-1A0A0A6YYK4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms