Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PRICKLE4Q2TBC4 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.13□□□□□ -0.47
PRICKLE4Q2TBC4 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC12.13□□□□□ -0.47
PRICKLE4Q2TBC4 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PRICKLE4Q2TBC4 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 TRIM80P-201ENST00000455685 2848 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 SNORA30.1-201ENST00000363193 129 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MIR632-201ENST00000385193 94 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MARCKSL1P2-201ENST00000401037 976 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 SERF2-205ENST00000403425 690 ntTSL 2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PGAM1P11-201ENST00000416729 680 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 KRT17P4-201ENST00000429445 819 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 HNRNPA1P55-201ENST00000505935 955 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 CCND3P2-201ENST00000579393 537 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MME-218ENST00000625667 363 ntTSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 LILRP2-202ENST00000413572 1383 ntBASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.12□□□□□ -0.47
PRICKLE4Q2TBC4 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC026271.1-201ENST00000447794 1348 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 PTGER4P2-201ENST00000328411 252 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 SLC25A6P1-201ENST00000412123 775 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 RPL3P5-201ENST00000441645 1232 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 PTGER4P3-201ENST00000458150 252 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 RN7SL678P-201ENST00000579533 299 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AP005212.2-201ENST00000584979 510 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AC009118.3-201ENST00000622896 873 ntBASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRICKLE4Q2TBC4 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms