Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC1A1P43005 AP000244.1-201ENST00000424582 201 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 PGK1P2-201ENST00000431702 1214 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC1A1P43005 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 SNORA47-201ENST00000458862 138 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 PRDX2P3-201ENST00000515779 586 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
SLC1A1P43005 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 DNM1P30-201ENST00000563586 452 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 DGKZP1-201ENST00000378718 2776 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 AC021305.1-201ENST00000520656 1514 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.67□□□□□ -0.22
SLC1A1P43005 AC093826.1-201ENST00000508655 993 ntBASIC13.67□□□□□ -0.22
SLC1A1P43005 HNRNPA1P7-201ENST00000521273 963 ntBASIC13.67□□□□□ -0.22
SLC1A1P43005 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 AC091304.3-201ENST00000566500 716 ntBASIC13.67□□□□□ -0.22
SLC1A1P43005 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC1A1P43005 AC023509.4-201ENST00000602306 775 ntBASIC13.67□□□□□ -0.22
SLC1A1P43005 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.67□□□□□ -0.22
SLC1A1P43005 MIR6842-201ENST00000612539 65 ntBASIC13.67□□□□□ -0.22
SLC1A1P43005 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A1P43005 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A1P43005 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A1P43005 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms