Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC1A1P43005 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 OR7E155P-201ENST00000412208 1014 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.73□□□□□ -0.21
SLC1A1P43005 AC105129.2-201ENST00000559536 390 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SLC1A1P43005 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SLC1A1P43005 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 AL353726.2-201ENST00000623259 884 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC1A1P43005 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 AC053503.6-201ENST00000623864 1843 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SLC1A1P43005 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 CICP2-201ENST00000420675 2328 ntBASIC13.73□□□□□ -0.21
SLC1A1P43005 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A1P43005 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A1P43005 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A1P43005 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SLC1A1P43005 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
SLC1A1P43005 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
SLC1A1P43005 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
SLC1A1P43005 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 AP000354.1-201ENST00000396982 456 ntBASIC13.72□□□□□ -0.21
SLC1A1P43005 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 AC078991.1-201ENST00000437297 610 ntBASIC13.72□□□□□ -0.21
SLC1A1P43005 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC13.72□□□□□ -0.21
SLC1A1P43005 RPL35P1-201ENST00000450819 370 ntBASIC13.72□□□□□ -0.21
SLC1A1P43005 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC13.72□□□□□ -0.21
SLC1A1P43005 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 AC008026.2-201ENST00000495438 348 ntBASIC13.72□□□□□ -0.21
SLC1A1P43005 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 AC013553.1-201ENST00000560906 267 ntBASIC13.72□□□□□ -0.21
SLC1A1P43005 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SLC1A1P43005 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A1P43005 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A1P43005 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A1P43005 AC009093.9-201ENST00000566038 1611 ntBASIC13.72□□□□□ -0.21
SLC1A1P43005 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms