Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 RPL29P2-202ENST00000498671 657 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MRPL22P1-201ENST00000505398 616 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 IGHV1-12-201ENST00000518307 205 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 METTL7AP1-201ENST00000547343 496 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MIR6770-3-201ENST00000616362 60 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MIR6770-2-201ENST00000618304 60 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MIR6770-1-201ENST00000622248 60 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC006453.1-201ENST00000636037 1257 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC099521.2-201ENST00000619354 2036 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC243964.3-201ENST00000623022 2028 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AL157832.2-205ENST00000597245 1649 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 HLA-DMA-203ENST00000395305 777 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC005077.2-201ENST00000449786 690 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RPS15P5-201ENST00000449885 432 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RN7SL81P-201ENST00000493781 261 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AP003170.2-201ENST00000544730 786 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 MIR3619-201ENST00000579667 83 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RN7SL574P-201ENST00000581512 297 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC084346.2-201ENST00000607097 949 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC007250.1-201ENST00000608934 338 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AL589935.2-201ENST00000616471 1231 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 AC137723.2-201ENST00000623540 398 ntBASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAF6Q9Y4K3 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms