Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.81□□□□□ -0.68
RCL1Q9Y2P8 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 DCK-204ENST00000504952 2614 ntTSL 3 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 IMPDH1P8-201ENST00000413639 1525 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 RPL3P2-204ENST00000413027 1203 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 CROCCP4-201ENST00000457096 498 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 AP000894.1-201ENST00000584430 520 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 AL136295.7-201ENST00000619226 1200 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 IGHV3-72-202ENST00000621503 303 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 AC120024.4-201ENST00000624285 2143 ntBASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 INO80-211ENST00000616814 4272 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RCL1Q9Y2P8 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 GBAP1-208ENST00000566701 1546 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC026469.1-201ENST00000621095 3306 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms