Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC135506.1-201ENST00000603877 1799 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 RN7SKP102-201ENST00000411186 315 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 PFN1P12-201ENST00000455938 534 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 PIGCP1-201ENST00000527583 895 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC012073.1-201ENST00000606114 1108 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC068338.3-201ENST00000617892 418 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 LPP-AS2-201ENST00000605573 2852 ntBASIC10.75□□□□□ -0.69
RAB40CQ96S21 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 AC133919.3-201ENST00000621407 1804 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AC005696.4-201ENST00000614400 3147 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 MIR645-201ENST00000385283 94 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AP000894.1-201ENST00000584430 520 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AC005695.3-201ENST00000614522 232 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 AL160287.1-203ENST00000637960 1061 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 HLA-C-210ENST00000640219 976 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms