Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SSR1P43307 AL512430.1-201ENST00000392575 860 ntBASIC14.18□□□□□ -0.14
SSR1P43307 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 AC234782.1-201ENST00000451950 919 ntBASIC14.18□□□□□ -0.14
SSR1P43307 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 AC079250.1-201ENST00000456046 531 ntBASIC14.18□□□□□ -0.14
SSR1P43307 RPL18AP3-201ENST00000462885 528 ntBASIC14.18□□□□□ -0.14
SSR1P43307 ORAOV1P1-201ENST00000503108 395 ntBASIC14.18□□□□□ -0.14
SSR1P43307 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.18□□□□□ -0.14
SSR1P43307 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.18□□□□□ -0.14
SSR1P43307 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 AL591926.3-201ENST00000611630 238 ntBASIC14.18□□□□□ -0.14
SSR1P43307 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SSR1P43307 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SSR1P43307 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC14.17□□□□□ -0.14
SSR1P43307 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 HLA-DMA-203ENST00000395305 777 ntBASIC14.17□□□□□ -0.14
SSR1P43307 SLC25A24P2-201ENST00000415059 510 ntBASIC14.17□□□□□ -0.14
SSR1P43307 GUSBP10-201ENST00000417412 665 ntBASIC14.17□□□□□ -0.14
SSR1P43307 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.17□□□□□ -0.14
SSR1P43307 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC14.17□□□□□ -0.14
SSR1P43307 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.17□□□□□ -0.14
SSR1P43307 CHCHD2P9-201ENST00000461726 456 ntBASIC14.17□□□□□ -0.14
SSR1P43307 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.17□□□□□ -0.14
SSR1P43307 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.17□□□□□ -0.14
SSR1P43307 AC011491.1-203ENST00000637688 543 ntBASIC14.17□□□□□ -0.14
SSR1P43307 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SSR1P43307 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.17□□□□□ -0.14
SSR1P43307 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.17□□□□□ -0.14
SSR1P43307 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSR1P43307 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms