Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC105020.5-201ENST00000614810 423 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 MS4A15-202ENST00000405633 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AL031663.2-201ENST00000417630 355 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC011890.1-201ENST00000427955 303 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC006960.2-201ENST00000435254 531 ntTSL 4 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HNRNPA1P8-201ENST00000436090 951 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 AC079385.2-201ENST00000547531 863 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CIAPIN1P-201ENST00000584883 931 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 LILRA2-202ENST00000251377 1799 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
VPS13DQ5THJ4 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 YBX1P7-201ENST00000436766 535 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 GNGT2-202ENST00000503070 522 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 PYY3-201ENST00000419078 213 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 ZFX-AS1-201ENST00000427551 417 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC124301.2-201ENST00000529781 556 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC124319.1-201ENST00000576808 653 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AP000695.2-202ENST00000454980 649 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 MIR4688-201ENST00000577966 83 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 LINC00694-202ENST00000634610 769 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 TNNT3-217ENST00000641225 877 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AC007614.4-201ENST00000564048 1827 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 EFHC1-219ENST00000636379 1829 ntTSL 5 BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms