Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC16.05■□□□□ 0.16
PDE6BP35913 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.04■□□□□ 0.16
PDE6BP35913 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDE6BP35913 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDE6BP35913 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC16.04■□□□□ 0.16
PDE6BP35913 MTND6P9-201ENST00000458075 519 ntBASIC16.04■□□□□ 0.16
PDE6BP35913 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 BCAR1P1-201ENST00000553953 636 ntBASIC16.04■□□□□ 0.16
PDE6BP35913 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
PDE6BP35913 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC16.04■□□□□ 0.16
PDE6BP35913 AC092327.1-201ENST00000596612 744 ntBASIC16.04■□□□□ 0.16
PDE6BP35913 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 AC106774.4-201ENST00000600799 409 ntBASIC16.04■□□□□ 0.16
PDE6BP35913 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC16.04■□□□□ 0.16
PDE6BP35913 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 Z82170.1-201ENST00000625081 3192 ntBASIC16.04■□□□□ 0.16
PDE6BP35913 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC16.04■□□□□ 0.16
PDE6BP35913 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDE6BP35913 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDE6BP35913 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDE6BP35913 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.04■□□□□ 0.16
PDE6BP35913 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 AL807752.1-201ENST00000395082 1322 ntBASIC16.03■□□□□ 0.16
PDE6BP35913 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC16.03■□□□□ 0.16
PDE6BP35913 PIN1P1-202ENST00000439639 301 ntBASIC16.03■□□□□ 0.16
PDE6BP35913 AL391822.1-201ENST00000452580 562 ntBASIC16.03■□□□□ 0.16
PDE6BP35913 PFN1P10-201ENST00000455962 327 ntBASIC16.03■□□□□ 0.16
PDE6BP35913 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC16.03■□□□□ 0.16
PDE6BP35913 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 AP001979.1-201ENST00000529222 751 ntBASIC16.03■□□□□ 0.16
PDE6BP35913 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms