Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.57□□□□□ -0.4
CLK1P49759 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 NRADDP-202ENST00000641269 1585 ntBASIC12.56□□□□□ -0.4
CLK1P49759 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.56□□□□□ -0.4
CLK1P49759 MIR1307-201ENST00000408840 149 ntBASIC12.56□□□□□ -0.4
CLK1P49759 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 AC234782.1-201ENST00000451950 919 ntBASIC12.56□□□□□ -0.4
CLK1P49759 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 RN7SL769P-201ENST00000469386 295 ntBASIC12.56□□□□□ -0.4
CLK1P49759 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.56□□□□□ -0.4
CLK1P49759 AC097724.1-201ENST00000609581 426 ntBASIC12.56□□□□□ -0.4
CLK1P49759 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CLK1P49759 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLK1P49759 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLK1P49759 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CLK1P49759 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.55□□□□□ -0.4
CLK1P49759 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.55□□□□□ -0.4
CLK1P49759 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.55□□□□□ -0.4
CLK1P49759 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CLK1P49759 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLK1P49759 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms