Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC1A1P43005 SNORA50D-202ENST00000627561 132 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.85□□□□□ -0.19
SLC1A1P43005 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC1A1P43005 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC1A1P43005 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC1A1P43005 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 FAM183BP-201ENST00000409072 1595 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 MIR324-201ENST00000362183 83 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 RN7SKP255-201ENST00000363442 313 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 RN7SKP203-201ENST00000363618 332 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 RN7SKP71-201ENST00000364558 318 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 7SK.1-201ENST00000365328 331 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC1A1P43005 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 AC244107.1-201ENST00000442033 332 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC1A1P43005 AC012146.4-201ENST00000575546 271 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 TRMT112P6-201ENST00000599234 372 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 AC007881.3-201ENST00000608897 607 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 AC242376.2-201ENST00000619355 883 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 AC005618.3-201ENST00000624928 458 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 AC007598.3-201ENST00000623077 1678 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC1A1P43005 CTBP2P8-201ENST00000422584 1330 ntBASIC13.84□□□□□ -0.19
SLC1A1P43005 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLC1A1P43005 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC1A1P43005 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC1A1P43005 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.19
SLC1A1P43005 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.83□□□□□ -0.19
SLC1A1P43005 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
SLC1A1P43005 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC1A1P43005 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC1A1P43005 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC1A1P43005 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.83□□□□□ -0.19
SLC1A1P43005 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
SLC1A1P43005 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC13.83□□□□□ -0.19
SLC1A1P43005 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms