Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC020922.4-201ENST00000621389 339 ntBASIC12.09□□□□□ -0.47
P04436 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
P04436 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04436 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
P04436 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04436 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
P04436 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
P04436 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
P04436 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P04436 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.08□□□□□ -0.48
P04436 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
P04436 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P04436 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.08□□□□□ -0.48
P04436 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
P04436 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
P04436 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC12.08□□□□□ -0.48
P04436 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
P04436 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
P04436 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC12.08□□□□□ -0.48
P04436 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.08□□□□□ -0.48
P04436 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P04436 AC010677.1-201ENST00000441690 412 ntBASIC12.08□□□□□ -0.48
P04436 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC12.08□□□□□ -0.48
P04436 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 AP000533.1-201ENST00000456143 1177 ntBASIC12.08□□□□□ -0.48
P04436 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12.08□□□□□ -0.48
P04436 AC114812.4-201ENST00000506676 757 ntBASIC12.08□□□□□ -0.48
P04436 FAM86KP-201ENST00000509817 987 ntBASIC12.08□□□□□ -0.48
P04436 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
P04436 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.08□□□□□ -0.48
P04436 AC079414.2-201ENST00000567157 1104 ntBASIC12.08□□□□□ -0.48
P04436 RN7SL524P-201ENST00000581152 300 ntBASIC12.08□□□□□ -0.48
P04436 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 PRR20FP-201ENST00000603320 180 ntBASIC12.08□□□□□ -0.48
P04436 AC092535.4-201ENST00000609548 397 ntBASIC12.08□□□□□ -0.48
P04436 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC12.08□□□□□ -0.48
P04436 AC008622.3-201ENST00000621170 600 ntBASIC12.08□□□□□ -0.48
P04436 AL160287.1-203ENST00000637960 1061 ntBASIC12.08□□□□□ -0.48
P04436 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
P04436 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.08□□□□□ -0.48
P04436 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P04436 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
P04436 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P04436 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04436 ATF4P4-201ENST00000393544 1930 ntBASIC12.07□□□□□ -0.48
P04436 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
P04436 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04436 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms