Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.12□□□□□ -0.15
O00370 METTL23-211ENST00000589977 617 ntTSL 3 BASIC14.12□□□□□ -0.15
O00370 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 AC211476.2-201ENST00000608799 708 ntBASIC14.12□□□□□ -0.15
O00370 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.12□□□□□ -0.15
O00370 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
O00370 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
O00370 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC14.12□□□□□ -0.15
O00370 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
O00370 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
O00370 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.12□□□□□ -0.15
O00370 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC14.12□□□□□ -0.15
O00370 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
O00370 AFG3L2P1-201ENST00000521792 1763 ntBASIC14.11□□□□□ -0.15
O00370 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
O00370 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
O00370 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
O00370 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.11□□□□□ -0.15
O00370 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.11□□□□□ -0.15
O00370 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
O00370 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
O00370 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.11□□□□□ -0.15
O00370 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
O00370 AL512599.1-201ENST00000430724 685 ntBASIC14.11□□□□□ -0.15
O00370 KRT8P38-201ENST00000441370 1430 ntBASIC14.11□□□□□ -0.15
O00370 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.11□□□□□ -0.15
O00370 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.11□□□□□ -0.15
O00370 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC14.11□□□□□ -0.15
O00370 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.11□□□□□ -0.15
O00370 RN7SL494P-201ENST00000461517 304 ntBASIC14.11□□□□□ -0.15
O00370 ALG1L3P-201ENST00000503331 765 ntBASIC14.11□□□□□ -0.15
O00370 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.11□□□□□ -0.15
O00370 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC14.11□□□□□ -0.15
O00370 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.11□□□□□ -0.15
O00370 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 MIR4687-201ENST00000583618 80 ntBASIC14.11□□□□□ -0.15
O00370 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.11□□□□□ -0.15
O00370 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.11□□□□□ -0.15
O00370 AC092117.1-201ENST00000621230 3250 ntBASIC14.11□□□□□ -0.15
O00370 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC14.11□□□□□ -0.15
O00370 TRIM80P-201ENST00000455685 2848 ntBASIC14.11□□□□□ -0.15
O00370 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC14.11□□□□□ -0.15
O00370 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
O00370 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
O00370 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
O00370 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
O00370 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.1□□□□□ -0.15
O00370 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC14.1□□□□□ -0.15
O00370 FKBP4P8-201ENST00000610931 1369 ntBASIC14.1□□□□□ -0.15
O00370 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
O00370 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
O00370 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
O00370 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
O00370 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms