Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.23■■□□□ 1.31
YIPF1Q9Y548 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
YIPF1Q9Y548 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.23■■□□□ 1.31
YIPF1Q9Y548 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 TERF1P2-201ENST00000583350 1212 ntBASIC23.22■■□□□ 1.31
YIPF1Q9Y548 LINC02228-203ENST00000641970 1355 ntBASIC23.22■■□□□ 1.31
YIPF1Q9Y548 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
YIPF1Q9Y548 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 IKBKGP1-201ENST00000612193 1073 ntBASIC23.21■■□□□ 1.31
YIPF1Q9Y548 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
YIPF1Q9Y548 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 KRT18P14-201ENST00000534205 1250 ntBASIC23.2■■□□□ 1.3
YIPF1Q9Y548 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 AC022517.1-201ENST00000592429 346 ntBASIC23.2■■□□□ 1.3
YIPF1Q9Y548 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
YIPF1Q9Y548 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
YIPF1Q9Y548 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
YIPF1Q9Y548 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.17■■□□□ 1.3
YIPF1Q9Y548 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
YIPF1Q9Y548 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.17■■□□□ 1.3
YIPF1Q9Y548 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
YIPF1Q9Y548 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
YIPF1Q9Y548 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 AC068587.7-201ENST00000641602 218 ntBASIC23.16■■□□□ 1.3
YIPF1Q9Y548 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
YIPF1Q9Y548 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
YIPF1Q9Y548 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.14■■□□□ 1.3
YIPF1Q9Y548 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 NTF6G-201ENST00000591094 616 ntBASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms