Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 AC009086.3-201ENST00000623486 1008 ntBASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
TSC22D4Q9Y3Q8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 ESRRAP2-201ENST00000418437 1549 ntBASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TSC22D4Q9Y3Q8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 AC241377.3-202ENST00000626088 1088 ntBASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 AC241585.3-202ENST00000628937 1088 ntBASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 AC245100.8-202ENST00000629247 1058 ntBASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TSC22D4Q9Y3Q8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.28■■□□□ 1
TSC22D4Q9Y3Q8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 AL356441.2-201ENST00000443009 864 ntBASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 AL499627.2-201ENST00000606283 725 ntBASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 SLC25A24-204ENST00000569674 2357 ntBASIC21.27■■□□□ 1
TSC22D4Q9Y3Q8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
TSC22D4Q9Y3Q8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TSC22D4Q9Y3Q8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TSC22D4Q9Y3Q8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSC22D4Q9Y3Q8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSC22D4Q9Y3Q8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 C1orf229-201ENST00000623686 2258 ntBASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.24■□□□□ 0.99
TSC22D4Q9Y3Q8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms