Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 AC244015.2-201ENST00000616358 1861 ntBASIC19.62■□□□□ 0.73
LSM2Q9Y333 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM2Q9Y333 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 AC144652.1-201ENST00000609974 1624 ntBASIC19.62■□□□□ 0.73
LSM2Q9Y333 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.61■□□□□ 0.73
LSM2Q9Y333 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LSM2Q9Y333 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 DUX4L9-201ENST00000449051 1259 ntBASIC19.61■□□□□ 0.73
LSM2Q9Y333 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
LSM2Q9Y333 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSM2Q9Y333 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
LSM2Q9Y333 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM2Q9Y333 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LSM2Q9Y333 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.59■□□□□ 0.73
LSM2Q9Y333 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.59■□□□□ 0.73
LSM2Q9Y333 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LSM2Q9Y333 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM2Q9Y333 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.59■□□□□ 0.73
LSM2Q9Y333 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
LSM2Q9Y333 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM2Q9Y333 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM2Q9Y333 AF131216.4-201ENST00000638924 1588 ntBASIC19.58■□□□□ 0.73
LSM2Q9Y333 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM2Q9Y333 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM2Q9Y333 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSM2Q9Y333 AC004448.1-201ENST00000458332 883 ntBASIC19.58■□□□□ 0.72
LSM2Q9Y333 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM2Q9Y333 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LSM2Q9Y333 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LSM2Q9Y333 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM2Q9Y333 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM2Q9Y333 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LSM2Q9Y333 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LSM2Q9Y333 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM2Q9Y333 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM2Q9Y333 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms