Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXA2Q9Y261 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXA2Q9Y261 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 AL356740.2-201ENST00000601559 647 ntBASIC17.8■□□□□ 0.44
FOXA2Q9Y261 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
FOXA2Q9Y261 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 AC139530.1-201ENST00000575312 1977 ntBASIC17.79■□□□□ 0.44
FOXA2Q9Y261 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FOXA2Q9Y261 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 AL117332.1-201ENST00000622628 974 ntBASIC17.78■□□□□ 0.44
FOXA2Q9Y261 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXA2Q9Y261 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 AC092053.2-201ENST00000640557 1818 ntBASIC17.77■□□□□ 0.44
FOXA2Q9Y261 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXA2Q9Y261 LINC01529-204ENST00000636474 1715 ntBASIC17.77■□□□□ 0.44
FOXA2Q9Y261 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXA2Q9Y261 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXA2Q9Y261 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
FOXA2Q9Y261 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXA2Q9Y261 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXA2Q9Y261 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXA2Q9Y261 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 MIR3621-201ENST00000580529 85 ntBASIC17.76■□□□□ 0.43
FOXA2Q9Y261 AC131212.1-201ENST00000613771 668 ntBASIC17.76■□□□□ 0.43
FOXA2Q9Y261 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXA2Q9Y261 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms