Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 AC004687.1-201ENST00000579003 1625 ntBASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 BX842568.3-201ENST00000418104 571 ntBASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHA6Q9UN73 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 AC091305.1-201ENST00000479476 895 ntBASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA6Q9UN73 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 AC027682.1-201ENST00000562846 899 ntBASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 AC233992.3-201ENST00000607491 485 ntBASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PCDHA6Q9UN73 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHA6Q9UN73 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.33■■□□□ 1.64
PCDHA6Q9UN73 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHA6Q9UN73 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 AC099791.1-201ENST00000416440 715 ntBASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 SLC47A1P1-202ENST00000449666 945 ntBASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA6Q9UN73 RASA4CP-201ENST00000424092 1398 ntBASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 CA15P2-201ENST00000611168 834 ntBASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHA6Q9UN73 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA6Q9UN73 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA6Q9UN73 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
PCDHA6Q9UN73 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA6Q9UN73 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA6Q9UN73 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 AC010525.1-201ENST00000585559 441 ntBASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDHA6Q9UN73 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 OR2I1P-207ENST00000453522 948 ntBASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHA6Q9UN73 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 AC068473.5-201ENST00000616428 2072 ntBASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 ZNRF2P3-201ENST00000424200 374 ntBASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA6Q9UN73 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 AC105265.2-201ENST00000467189 838 ntBASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms