Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 DUSP8P3-201ENST00000399571 1760 ntBASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
UBQLN1Q9UMX0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 MIR572-201ENST00000384983 95 ntBASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 RARRES2P6-201ENST00000567333 442 ntBASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
UBQLN1Q9UMX0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 AL031602.1-201ENST00000633169 911 ntBASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBQLN1Q9UMX0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
UBQLN1Q9UMX0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
UBQLN1Q9UMX0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.7■■□□□ 1.38
UBQLN1Q9UMX0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
UBQLN1Q9UMX0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.7■■□□□ 1.38
UBQLN1Q9UMX0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.7■■□□□ 1.38
UBQLN1Q9UMX0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
UBQLN1Q9UMX0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
UBQLN1Q9UMX0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBQLN1Q9UMX0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 AC026271.2-201ENST00000428091 497 ntBASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 AC087239.1-201ENST00000622671 572 ntBASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBQLN1Q9UMX0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 AL358852.1-201ENST00000623174 1268 ntBASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms