Protein–RNA interactions for Protein: Q9UJ94

LINC00527, Putative uncharacterized protein encoded by LINC00527, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00527Q9UJ94 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00527Q9UJ94 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 AC105265.2-201ENST00000467189 838 ntBASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 AC126544.1-201ENST00000580842 1059 ntBASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 AC233992.3-201ENST00000607491 485 ntBASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 CA15P2-201ENST00000611168 834 ntBASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00527Q9UJ94 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 ZNRF2P3-201ENST00000424200 374 ntBASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 AC091305.1-201ENST00000479476 895 ntBASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 AC027682.1-201ENST00000562846 899 ntBASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00527Q9UJ94 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 BX842568.3-201ENST00000418104 571 ntBASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 C9orf163-202ENST00000624034 2573 ntBASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00527Q9UJ94 RASA4CP-201ENST00000424092 1398 ntBASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00527Q9UJ94 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
LINC00527Q9UJ94 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00527Q9UJ94 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms