Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSFQ9UBX1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSFQ9UBX1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 AC097381.1-201ENST00000429019 1296 ntBASIC20.77■□□□□ 0.92
CTSFQ9UBX1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 MIR6821-201ENST00000617625 74 ntBASIC20.77■□□□□ 0.92
CTSFQ9UBX1 AC092068.2-201ENST00000590491 1708 ntBASIC20.77■□□□□ 0.92
CTSFQ9UBX1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSFQ9UBX1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 AP005435.1-201ENST00000529293 1178 ntBASIC20.76■□□□□ 0.91
CTSFQ9UBX1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 AC087623.3-201ENST00000607047 1098 ntBASIC20.76■□□□□ 0.91
CTSFQ9UBX1 MIR5787-201ENST00000611784 55 ntBASIC20.76■□□□□ 0.91
CTSFQ9UBX1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSFQ9UBX1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 MIR572-201ENST00000384983 95 ntBASIC20.75■□□□□ 0.91
CTSFQ9UBX1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTSFQ9UBX1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 MIR6084-201ENST00000622012 110 ntBASIC20.74■□□□□ 0.91
CTSFQ9UBX1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
CTSFQ9UBX1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTSFQ9UBX1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms