Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD9Q9P000 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD9Q9P000 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD9Q9P000 AC090877.2-201ENST00000558441 1738 ntBASIC18.7■□□□□ 0.58
COMMD9Q9P000 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
COMMD9Q9P000 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD9Q9P000 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD9Q9P000 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD9Q9P000 AC092053.2-201ENST00000640557 1818 ntBASIC18.7■□□□□ 0.58
COMMD9Q9P000 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COMMD9Q9P000 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 AL592295.1-201ENST00000400984 884 ntBASIC18.69■□□□□ 0.58
COMMD9Q9P000 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.69■□□□□ 0.58
COMMD9Q9P000 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD9Q9P000 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD9Q9P000 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
COMMD9Q9P000 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 AL121603.2-201ENST00000557373 2117 ntBASIC18.68■□□□□ 0.58
COMMD9Q9P000 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD9Q9P000 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COMMD9Q9P000 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD9Q9P000 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COMMD9Q9P000 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD9Q9P000 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
COMMD9Q9P000 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD9Q9P000 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.67■□□□□ 0.58
COMMD9Q9P000 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD9Q9P000 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COMMD9Q9P000 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.67■□□□□ 0.58
COMMD9Q9P000 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD9Q9P000 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD9Q9P000 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD9Q9P000 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COMMD9Q9P000 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD9Q9P000 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD9Q9P000 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 AC087393.1-201ENST00000582896 145 ntBASIC18.66■□□□□ 0.58
COMMD9Q9P000 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD9Q9P000 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COMMD9Q9P000 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD9Q9P000 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD9Q9P000 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 AL592293.1-201ENST00000502889 1188 ntBASIC18.65■□□□□ 0.58
COMMD9Q9P000 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.65■□□□□ 0.58
COMMD9Q9P000 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD9Q9P000 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD9Q9P000 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
COMMD9Q9P000 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
COMMD9Q9P000 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 FBXW4P1-201ENST00000426721 2239 ntBASIC18.65■□□□□ 0.58
COMMD9Q9P000 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD9Q9P000 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COMMD9Q9P000 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
COMMD9Q9P000 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.64■□□□□ 0.57
COMMD9Q9P000 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD9Q9P000 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COMMD9Q9P000 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD9Q9P000 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.64■□□□□ 0.57
COMMD9Q9P000 MIR6765-201ENST00000614092 87 ntBASIC18.64■□□□□ 0.57
COMMD9Q9P000 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COMMD9Q9P000 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD9Q9P000 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD9Q9P000 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.64■□□□□ 0.57
COMMD9Q9P000 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms