Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.04■□□□□ 0.96
TIMMDC1Q9NPL8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 AL161729.1-201ENST00000604104 1402 ntBASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TIMMDC1Q9NPL8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 AL512631.2-201ENST00000604634 923 ntBASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 MIR4466-201ENST00000606121 54 ntBASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMMDC1Q9NPL8 AC073130.3-201ENST00000624389 2278 ntBASIC21.02■□□□□ 0.95
TIMMDC1Q9NPL8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.02■□□□□ 0.95
TIMMDC1Q9NPL8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.02■□□□□ 0.95
TIMMDC1Q9NPL8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMMDC1Q9NPL8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 HLA-L-211ENST00000482052 1765 ntBASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMMDC1Q9NPL8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TIMMDC1Q9NPL8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMMDC1Q9NPL8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.97■□□□□ 0.95
TIMMDC1Q9NPL8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms