Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20AQ9NP66 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20AQ9NP66 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.96■□□□□ 0.79
HMG20AQ9NP66 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20AQ9NP66 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20AQ9NP66 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMG20AQ9NP66 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
HMG20AQ9NP66 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.94■□□□□ 0.78
HMG20AQ9NP66 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMG20AQ9NP66 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMG20AQ9NP66 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HMG20AQ9NP66 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMG20AQ9NP66 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMG20AQ9NP66 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMG20AQ9NP66 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMG20AQ9NP66 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMG20AQ9NP66 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMG20AQ9NP66 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20AQ9NP66 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20AQ9NP66 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms