Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD8Q9HCK8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.94■□□□□ 0.94
CHD8Q9HCK8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD8Q9HCK8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHD8Q9HCK8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 KRT18P21-201ENST00000515767 1272 ntBASIC20.92■□□□□ 0.94
CHD8Q9HCK8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD8Q9HCK8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.91■□□□□ 0.94
CHD8Q9HCK8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD8Q9HCK8 MIR4497-201ENST00000583208 89 ntBASIC20.9■□□□□ 0.94
CHD8Q9HCK8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD8Q9HCK8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHD8Q9HCK8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHD8Q9HCK8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 ERN1-208ENST00000606895 2068 ntBASIC20.89■□□□□ 0.93
CHD8Q9HCK8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.89■□□□□ 0.93
CHD8Q9HCK8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD8Q9HCK8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD8Q9HCK8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 MKRN4P-201ENST00000444706 1521 ntBASIC20.86■□□□□ 0.93
CHD8Q9HCK8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms