Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 AC136469.2-201ENST00000623944 1028 ntBASIC18.9■□□□□ 0.62
MSL2Q9HCI7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSL2Q9HCI7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MSL2Q9HCI7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSL2Q9HCI7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 MIR638-201ENST00000385237 100 ntBASIC18.87■□□□□ 0.61
MSL2Q9HCI7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MSL2Q9HCI7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.86■□□□□ 0.61
MSL2Q9HCI7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSL2Q9HCI7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.85■□□□□ 0.61
MSL2Q9HCI7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 EDA-201ENST00000338901 1233 ntBASIC18.84■□□□□ 0.61
MSL2Q9HCI7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 AC133561.4-201ENST00000566112 224 ntBASIC18.84■□□□□ 0.61
MSL2Q9HCI7 AC005837.3-201ENST00000612163 286 ntBASIC18.84■□□□□ 0.61
MSL2Q9HCI7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MSL2Q9HCI7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MSL2Q9HCI7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSL2Q9HCI7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MSL2Q9HCI7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSL2Q9HCI7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms