Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VRTNQ9H8Y1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VRTNQ9H8Y1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 AC091305.1-201ENST00000479476 895 ntBASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 AF213884.3-201ENST00000563833 479 ntBASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.61■■□□□ 1.37
VRTNQ9H8Y1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 RASA4CP-201ENST00000424092 1398 ntBASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
VRTNQ9H8Y1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 AP005435.1-201ENST00000529293 1178 ntBASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 AC068587.7-201ENST00000641602 218 ntBASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.59■■□□□ 1.37
VRTNQ9H8Y1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VRTNQ9H8Y1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VRTNQ9H8Y1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
VRTNQ9H8Y1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
VRTNQ9H8Y1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.58■■□□□ 1.37
VRTNQ9H8Y1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
VRTNQ9H8Y1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
VRTNQ9H8Y1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.36
VRTNQ9H8Y1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 AC099791.1-201ENST00000416440 715 ntBASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 AC142381.2-201ENST00000566120 298 ntBASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
VRTNQ9H8Y1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 AC008764.7-201ENST00000593779 1081 ntBASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
VRTNQ9H8Y1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.55■■□□□ 1.36
VRTNQ9H8Y1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 CA15P2-201ENST00000611168 834 ntBASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.54■■□□□ 1.36
VRTNQ9H8Y1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms