Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 MIR5787-201ENST00000611784 55 ntBASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 MIR6084-201ENST00000622012 110 ntBASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
MINDY3Q9H8M7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 AL031602.1-201ENST00000633169 911 ntBASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MINDY3Q9H8M7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MINDY3Q9H8M7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 AC012414.1-201ENST00000556676 535 ntBASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MINDY3Q9H8M7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 AL358852.1-201ENST00000623174 1268 ntBASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
MINDY3Q9H8M7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
MINDY3Q9H8M7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
MINDY3Q9H8M7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
MINDY3Q9H8M7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
MINDY3Q9H8M7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.14■■□□□ 1.46
MINDY3Q9H8M7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
MINDY3Q9H8M7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
MINDY3Q9H8M7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.14■■□□□ 1.45
MINDY3Q9H8M7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
MINDY3Q9H8M7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
MINDY3Q9H8M7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
MINDY3Q9H8M7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.13■■□□□ 1.45
MINDY3Q9H8M7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 AC027612.3-201ENST00000413684 1047 ntBASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 YBX1P1-201ENST00000445822 960 ntBASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
MINDY3Q9H8M7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms