Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.08■■□□□ 1.76
RNF41Q9H4P4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF41Q9H4P4 RASA4CP-201ENST00000424092 1398 ntBASIC26.07■■□□□ 1.76
RNF41Q9H4P4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF41Q9H4P4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 AC099791.1-201ENST00000416440 715 ntBASIC26.05■■□□□ 1.76
RNF41Q9H4P4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF41Q9H4P4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
RNF41Q9H4P4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 AC068587.7-201ENST00000641602 218 ntBASIC26.03■■□□□ 1.76
RNF41Q9H4P4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
RNF41Q9H4P4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 AP005435.1-201ENST00000529293 1178 ntBASIC26.02■■□□□ 1.76
RNF41Q9H4P4 AC126544.1-201ENST00000580842 1059 ntBASIC26.02■■□□□ 1.76
RNF41Q9H4P4 CA15P2-201ENST00000611168 834 ntBASIC26.02■■□□□ 1.76
RNF41Q9H4P4 AL031602.1-201ENST00000633169 911 ntBASIC26.02■■□□□ 1.76
RNF41Q9H4P4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF41Q9H4P4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
RNF41Q9H4P4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26■■□□□ 1.75
RNF41Q9H4P4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26■■□□□ 1.75
RNF41Q9H4P4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF41Q9H4P4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF41Q9H4P4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF41Q9H4P4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
RNF41Q9H4P4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
RNF41Q9H4P4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26■■□□□ 1.75
RNF41Q9H4P4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
RNF41Q9H4P4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF41Q9H4P4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms