Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD4Q9H0A8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD4Q9H0A8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
COMMD4Q9H0A8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD4Q9H0A8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COMMD4Q9H0A8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD4Q9H0A8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD4Q9H0A8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 TSPY13P-201ENST00000338964 914 ntBASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COMMD4Q9H0A8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD4Q9H0A8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
COMMD4Q9H0A8 AC080038.3-201ENST00000623346 1952 ntBASIC19.39■□□□□ 0.7
COMMD4Q9H0A8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD4Q9H0A8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COMMD4Q9H0A8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COMMD4Q9H0A8 AC010980.1-201ENST00000587192 1142 ntBASIC19.38■□□□□ 0.69
COMMD4Q9H0A8 AC007375.3-201ENST00000600936 2314 ntBASIC19.38■□□□□ 0.69
COMMD4Q9H0A8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD4Q9H0A8 PVT1_1.1-201ENST00000615125 194 ntBASIC19.38■□□□□ 0.69
COMMD4Q9H0A8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms