Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF2Q99805 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TM9SF2Q99805 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF2Q99805 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF2Q99805 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF2Q99805 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF2Q99805 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF2Q99805 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
TM9SF2Q99805 LINC00526-201ENST00000581067 1875 ntBASIC20.3■□□□□ 0.84
TM9SF2Q99805 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.29■□□□□ 0.84
TM9SF2Q99805 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 GUSBP5-202ENST00000510805 1989 ntBASIC20.29■□□□□ 0.84
TM9SF2Q99805 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TM9SF2Q99805 UNC93B3-201ENST00000308076 687 ntBASIC20.29■□□□□ 0.84
TM9SF2Q99805 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 PBX2P1-201ENST00000493219 1291 ntBASIC20.29■□□□□ 0.84
TM9SF2Q99805 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TM9SF2Q99805 AC106739.1-201ENST00000617035 715 ntBASIC20.29■□□□□ 0.84
TM9SF2Q99805 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.29■□□□□ 0.84
TM9SF2Q99805 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 AC092068.2-201ENST00000590491 1708 ntBASIC20.29■□□□□ 0.84
TM9SF2Q99805 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF2Q99805 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TM9SF2Q99805 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF2Q99805 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF2Q99805 AC005837.3-201ENST00000612163 286 ntBASIC20.28■□□□□ 0.84
TM9SF2Q99805 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF2Q99805 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF2Q99805 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF2Q99805 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.28■□□□□ 0.84
TM9SF2Q99805 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF2Q99805 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF2Q99805 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF2Q99805 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF2Q99805 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF2Q99805 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF2Q99805 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 AL136162.1-201ENST00000607711 1078 ntBASIC20.27■□□□□ 0.84
TM9SF2Q99805 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF2Q99805 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF2Q99805 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.27■□□□□ 0.83
TM9SF2Q99805 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TM9SF2Q99805 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM9SF2Q99805 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.26■□□□□ 0.83
TM9SF2Q99805 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM9SF2Q99805 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM9SF2Q99805 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM9SF2Q99805 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.26■□□□□ 0.83
TM9SF2Q99805 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.26■□□□□ 0.83
TM9SF2Q99805 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.26■□□□□ 0.83
TM9SF2Q99805 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.26■□□□□ 0.83
TM9SF2Q99805 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM9SF2Q99805 AC135279.3-201ENST00000610945 1311 ntBASIC20.26■□□□□ 0.83
TM9SF2Q99805 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms