Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
CCL13Q99616 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCL13Q99616 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CCL13Q99616 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL13Q99616 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL13Q99616 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL13Q99616 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCL13Q99616 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCL13Q99616 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.46■□□□□ 0.55
CCL13Q99616 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL13Q99616 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.46■□□□□ 0.55
CCL13Q99616 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.46■□□□□ 0.55
CCL13Q99616 MIR4767-201ENST00000582827 78 ntBASIC18.46■□□□□ 0.55
CCL13Q99616 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCL13Q99616 AC136469.2-201ENST00000623944 1028 ntBASIC18.46■□□□□ 0.55
CCL13Q99616 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.46■□□□□ 0.55
CCL13Q99616 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.46■□□□□ 0.55
CCL13Q99616 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.46■□□□□ 0.55
CCL13Q99616 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.46■□□□□ 0.55
CCL13Q99616 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL13Q99616 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL13Q99616 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.45■□□□□ 0.54
CCL13Q99616 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.45■□□□□ 0.54
CCL13Q99616 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCL13Q99616 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.45■□□□□ 0.54
CCL13Q99616 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL13Q99616 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCL13Q99616 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.45■□□□□ 0.54
CCL13Q99616 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CCL13Q99616 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCL13Q99616 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.45■□□□□ 0.54
CCL13Q99616 AC106739.1-201ENST00000617035 715 ntBASIC18.45■□□□□ 0.54
CCL13Q99616 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.45■□□□□ 0.54
CCL13Q99616 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL13Q99616 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCL13Q99616 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL13Q99616 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.45■□□□□ 0.54
CCL13Q99616 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCL13Q99616 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCL13Q99616 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.44■□□□□ 0.54
CCL13Q99616 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CCL13Q99616 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CCL13Q99616 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCL13Q99616 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL13Q99616 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCL13Q99616 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCL13Q99616 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.43■□□□□ 0.54
CCL13Q99616 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCL13Q99616 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL13Q99616 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCL13Q99616 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL13Q99616 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CCL13Q99616 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.42■□□□□ 0.54
CCL13Q99616 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.42■□□□□ 0.54
CCL13Q99616 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.42■□□□□ 0.54
CCL13Q99616 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCL13Q99616 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCL13Q99616 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.42■□□□□ 0.54
CCL13Q99616 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCL13Q99616 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCL13Q99616 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCL13Q99616 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.41■□□□□ 0.54
CCL13Q99616 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCL13Q99616 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCL13Q99616 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCL13Q99616 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.41■□□□□ 0.54
CCL13Q99616 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.41■□□□□ 0.54
CCL13Q99616 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.41■□□□□ 0.54
CCL13Q99616 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.41■□□□□ 0.54
CCL13Q99616 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCL13Q99616 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCL13Q99616 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCL13Q99616 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.41■□□□□ 0.54
CCL13Q99616 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCL13Q99616 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.41■□□□□ 0.54
CCL13Q99616 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL13Q99616 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL13Q99616 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCL13Q99616 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL13Q99616 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms