Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 ABCB10P4-201ENST00000566803 2184 ntBASIC17.94■□□□□ 0.46
ZNF48Q96MX3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.94■□□□□ 0.46
ZNF48Q96MX3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF48Q96MX3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 AC144652.1-201ENST00000609974 1624 ntBASIC17.92■□□□□ 0.46
ZNF48Q96MX3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 AC123595.1-201ENST00000440769 1046 ntBASIC17.92■□□□□ 0.46
ZNF48Q96MX3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF48Q96MX3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 AL354811.1-201ENST00000610286 706 ntBASIC17.91■□□□□ 0.46
ZNF48Q96MX3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF48Q96MX3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 LINC01529-204ENST00000636474 1715 ntBASIC17.9■□□□□ 0.46
ZNF48Q96MX3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 CCDC92B-201ENST00000575506 885 ntBASIC17.9■□□□□ 0.46
ZNF48Q96MX3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF48Q96MX3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF48Q96MX3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF48Q96MX3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 DUSP8P5-201ENST00000422884 1815 ntBASIC17.89■□□□□ 0.45
ZNF48Q96MX3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms